Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 291-765 |
| Cow position: | chr11:53680423-53679953 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 318-776 |
| Cow position: | chr11:26368609-26368141 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 29, 150 |
| Conread position: | 324-1004 |
| Cow position: | chr11:21621817-21622491 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 327-499 |
| Cow position: | chr11:35732573-35732748 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 328-579 |
| Cow position: | chr11:16197353-16197597 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 328-761 |
| Cow position: | chr11:43508696-43509112 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 331-759 |
| Cow position: | chr11:67545296-67545712 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 132 |
| Conread position: | 331-765 |
| Cow position: | chr11:33913192-33912768 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 331-776 |
| Cow position: | chr11:55010514-55010939 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 331-776 |
| Cow position: | chr11:64888476-64888054 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 190, 60 |
| Conread position: | 331-935 |
| Cow position: | chr11:64125545-64124951 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 331-960 |
| Cow position: | chr11:39660849-39660234 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 365-518 |
| Cow position: | chr11:32601198-32601050 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 365-518 |
| Cow position: | chr11:40621315-40621164 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 365-695 |
| Cow position: | chr11:13737788-13737476 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 365-720 |
| Cow position: | chr11:37489794-37489447 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 366-748 |
| Cow position: | chr11:86669150-86668778 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 367-514 |
| Cow position: | chr11:41459840-41459987 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-770 |
| Cow position: | chr11:82102668-82103050 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 177, 54 |
| Conread position: | 389-770 |
| Cow position: | chr11:48662462-48662821 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 433-741 |
| Cow position: | chr11:21911352-21911657 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 483-752 |
| Cow position: | chr11:68627361-68627634 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 501-752 |
| Cow position: | chr11:5608738-5608991 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 531-754 |
| Cow position: | chr11:43252817-43252592 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 536-765 |
| Cow position: | chr11:66888520-66888300 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 539-765 |
| Cow position: | chr11:916959-916742 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 733-1000 |
| Cow position: | chr11:37486582-37486311 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 165, 178 |
Show alignments to all cow chromosomes.