Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 303-742 |
| Cow position: | chr13:19546056-19546481 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 320-764 |
| Cow position: | chr13:56680694-56680267 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 325-500 |
| Cow position: | chr13:646362-646188 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 325-691 |
| Cow position: | chr13:47645795-47645451 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 325-710 |
| Cow position: | chr13:41843543-41843174 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 326-776 |
| Cow position: | chr13:61030662-61031098 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 200 |
| Conread position: | 326-929 |
| Cow position: | chr13:31495158-31494587 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 389 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 328-758 |
| Cow position: | chr13:14699576-14699161 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 328-801 |
| Cow position: | chr13:12485058-12484588 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 122 |
| Conread position: | 329-520 |
| Cow position: | chr13:28591840-28592033 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 113 |
| Conread position: | 337-549 |
| Cow position: | chr13:15591194-15591408 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 190 |
| Conread position: | 337-766 |
| Cow position: | chr13:262917-262500 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 360-915 |
| Cow position: | chr13:34348791-34348253 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 357 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 364-766 |
| Cow position: | chr13:38463261-38463643 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 69 |
| Conread position: | 365-584 |
| Cow position: | chr13:28091314-28091531 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 186, 67 |
| Conread position: | 365-713 |
| Cow position: | chr13:30765952-30765621 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 194, 77 |
| Conread position: | 372-765 |
| Cow position: | chr13:60312687-60312302 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 399-764 |
| Cow position: | chr13:35752011-35751656 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 423-642 |
| Cow position: | chr13:54407848-54408071 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 428-683 |
| Cow position: | chr13:12701998-12702249 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 459-744 |
| Cow position: | chr13:2215268-2214985 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 476-758 |
| Cow position: | chr13:11547985-11547704 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 484-734 |
| Cow position: | chr13:44800674-44800425 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 139 |
| Conread position: | 491-765 |
| Cow position: | chr13:2360687-2360417 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 129 |
| Conread position: | 501-692 |
| Cow position: | chr13:7333230-7333417 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 118 |
| Conread position: | 536-763 |
| Cow position: | chr13:51120831-51121063 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 87 |
Show alignments to all cow chromosomes.