Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 326-776 |
| Cow position: | chr15:15213876-15214307 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 327-765 |
| Cow position: | chr15:11210114-11210551 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 328-935 |
| Cow position: | chr15:36525391-36524802 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 381 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 337-708 |
| Cow position: | chr15:31942549-31942185 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 365-579 |
| Cow position: | chr15:36107848-36108060 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 367-719 |
| Cow position: | chr15:7880574-7880920 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 170 |
| Conread position: | 367-719 |
| Cow position: | chr15:9012545-9012893 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 193 |
| Conread position: | 368-703 |
| Cow position: | chr15:33701317-33700988 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 373-798 |
| Cow position: | chr15:8453717-8453305 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 179, 71 |
| Conread position: | 377-1002 |
| Cow position: | chr15:31273537-31274146 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 416-765 |
| Cow position: | chr15:6162367-6162707 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 157 |
| Conread position: | 428-765 |
| Cow position: | chr15:43356352-43356013 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 433-728 |
| Cow position: | chr15:42610907-42610617 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 116, 11 |
| Conread position: | 434-875 |
| Cow position: | chr15:2914386-2914815 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 445-703 |
| Cow position: | chr15:45004788-45004546 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 445-968 |
| Cow position: | chr15:2945990-2946501 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 23 |
| Conread position: | 454-716 |
| Cow position: | chr15:44149796-44150045 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 457-765 |
| Cow position: | chr15:12688835-12689122 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 491-763 |
| Cow position: | chr15:29541072-29540803 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 496-1037 |
| Cow position: | chr15:29214163-29213626 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 628-759 |
| Cow position: | chr15:5226544-5226676 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 667-919 |
| Cow position: | chr15:8983238-8982989 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 676-825 |
| Cow position: | chr15:52821886-52822030 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.