Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 326-1000 |
| Cow position: | chr16:9252225-9252887 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 430 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 331-519 |
| Cow position: | chr16:32174042-32173853 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 331-563 |
| Cow position: | chr16:54011844-54011608 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 331-570 |
| Cow position: | chr16:16332033-16332276 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 333-765 |
| Cow position: | chr16:40009426-40009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 338-621 |
| Cow position: | chr16:19711141-19711419 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 73 |
| Conread position: | 345-1001 |
| Cow position: | chr16:45573193-45572553 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 434 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 358-631 |
| Cow position: | chr16:27159107-27159374 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 362-763 |
| Cow position: | chr16:12309325-12308943 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 60 |
| Conread position: | 364-734 |
| Cow position: | chr16:17034563-17034199 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 13 |
| Conread position: | 365-540 |
| Cow position: | chr16:56599191-56599365 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 365-623 |
| Cow position: | chr16:51098285-51098535 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 365-713 |
| Cow position: | chr16:52928146-52928483 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 181, 63 |
| Conread position: | 369-763 |
| Cow position: | chr16:12136369-12135961 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 389-765 |
| Cow position: | chr16:6920263-6920633 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 410-1003 |
| Cow position: | chr16:9574696-9575267 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 382 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 168, 31 |
| Conread position: | 414-684 |
| Cow position: | chr16:33657161-33656904 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 414-765 |
| Cow position: | chr16:24024052-24023703 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 414-765 |
| Cow position: | chr16:40523320-40522970 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 433-762 |
| Cow position: | chr16:4550700-4550376 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 433-765 |
| Cow position: | chr16:18054086-18053753 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 483-765 |
| Cow position: | chr16:19898265-19897983 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 487-770 |
| Cow position: | chr16:30800378-30800101 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 491-744 |
| Cow position: | chr16:10670642-10670397 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 642-862 |
| Cow position: | chr16:19711417-19711633 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 191, 7 |
Show alignments to all cow chromosomes.