Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 319-579 |
| Cow position: | chr17:22519836-22520103 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 6, 105 |
| Conread position: | 327-765 |
| Cow position: | chr17:1262561-1262145 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 327-877 |
| Cow position: | chr17:20318399-20317863 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 328-579 |
| Cow position: | chr17:18888028-18888276 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 331-580 |
| Cow position: | chr17:10049180-10048927 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 332-575 |
| Cow position: | chr17:1230582-1230338 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 337-696 |
| Cow position: | chr17:33244447-33244796 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 338-795 |
| Cow position: | chr17:20194432-20193988 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 365-662 |
| Cow position: | chr17:21605650-21605363 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 186, 63 |
| Conread position: | 365-713 |
| Cow position: | chr17:38875206-38874878 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 194, 61 |
| Conread position: | 365-776 |
| Cow position: | chr17:13381541-13381951 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 365-1002 |
| Cow position: | chr17:14610369-14609751 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 85 |
| Conread position: | 369-762 |
| Cow position: | chr17:11242363-11242740 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 42 |
| Conread position: | 389-567 |
| Cow position: | chr17:1554642-1554465 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 392-755 |
| Cow position: | chr17:13321787-13322146 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 414-764 |
| Cow position: | chr17:24816071-24815730 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 414-765 |
| Cow position: | chr17:1759154-1759498 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 427-716 |
| Cow position: | chr17:42010595-42010875 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 428-749 |
| Cow position: | chr17:16387027-16387331 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 197 |
| Conread position: | 471-716 |
| Cow position: | chr17:20185324-20185093 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 488-765 |
| Cow position: | chr17:22872483-22872225 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 514-710 |
| Cow position: | chr17:36036666-36036858 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 667-1017 |
| Cow position: | chr17:10048621-10048266 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 203 |
| Conread position: | 721-868 |
| Cow position: | chr17:18890544-18890691 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 726-954 |
| Cow position: | chr17:18890762-18890979 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 138, 0 |
Show alignments to all cow chromosomes.