Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 292-765 |
| Cow position: | chr2:10144215-10144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 317-710 |
| Cow position: | chr2:49983411-49983787 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 326-567 |
| Cow position: | chr2:15863926-15863684 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 326-996 |
| Cow position: | chr2:6938626-6939272 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 327-584 |
| Cow position: | chr2:39790108-39790366 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 327-765 |
| Cow position: | chr2:58536761-58536319 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 327-776 |
| Cow position: | chr2:2073259-2072821 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 327-930 |
| Cow position: | chr2:36856973-36856377 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 386 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 328-765 |
| Cow position: | chr2:63090755-63090335 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 329-784 |
| Cow position: | chr2:48859176-48859621 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 331-583 |
| Cow position: | chr2:39580510-39580260 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 331-621 |
| Cow position: | chr2:66059135-66059415 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 331-730 |
| Cow position: | chr2:86527559-86527945 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 331-758 |
| Cow position: | chr2:36584841-36584430 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 331-999 |
| Cow position: | chr2:76037984-76037359 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 422 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 331-1000 |
| Cow position: | chr2:8737128-8736494 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 331-1001 |
| Cow position: | chr2:40474236-40473605 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 332-631 |
| Cow position: | chr2:61464079-61464375 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 86 |
| Conread position: | 345-1038 |
| Cow position: | chr2:44204449-44203794 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 442 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 204, 76 |
| Conread position: | 360-991 |
| Cow position: | chr2:76047950-76048538 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 402 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 198, 88 |
| Conread position: | 365-715 |
| Cow position: | chr2:45308540-45308870 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 365-757 |
| Cow position: | chr2:37571710-37571321 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 144 |
| Conread position: | 365-960 |
| Cow position: | chr2:65780880-65780320 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 382 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 108, 32 |
| Conread position: | 368-535 |
| Cow position: | chr2:14956891-14957060 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 368-713 |
| Cow position: | chr2:3715070-3714721 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 377-776 |
| Cow position: | chr2:23608131-23607752 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 172, 68 |
| Conread position: | 394-609 |
| Cow position: | chr2:41060938-41061150 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 395-776 |
| Cow position: | chr2:74897396-74897024 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 414-765 |
| Cow position: | chr2:41124540-41124875 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 416-765 |
| Cow position: | chr2:44079023-44078695 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 132, 10 |
| Conread position: | 433-765 |
| Cow position: | chr2:78809430-78809767 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 451-707 |
| Cow position: | chr2:38177949-38177693 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 100, 95 |
| Conread position: | 453-998 |
| Cow position: | chr2:33204408-33204940 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 483-765 |
| Cow position: | chr2:58971027-58971307 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 483-997 |
| Cow position: | chr2:61681083-61680599 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 605-765 |
| Cow position: | chr2:66059534-66059690 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 625-764 |
| Cow position: | chr2:41061148-41061289 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 635-765 |
| Cow position: | chr2:46279498-46279369 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 654-877 |
| Cow position: | chr2:69309012-69309235 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 654-904 |
| Cow position: | chr2:17370060-17370308 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 105, 190 |
| Conread position: | 702-1008 |
| Cow position: | chr2:8513982-8514272 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 267, 117 |
| Conread position: | 780-967 |
| Cow position: | chr2:73112568-73112381 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 802-1000 |
| Cow position: | chr2:48859573-48859773 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 167, 0 |
Show alignments to all cow chromosomes.