Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 328-562 |
| Cow position: | chr25:36157894-36157656 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 328-693 |
| Cow position: | chr25:17630370-17630722 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 330-570 |
| Cow position: | chr25:15661939-15662180 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 331-565 |
| Cow position: | chr25:2501517-2501282 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 331-568 |
| Cow position: | chr25:11486824-11487063 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 331-580 |
| Cow position: | chr25:40632468-40632227 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 331-765 |
| Cow position: | chr25:13847169-13847606 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 331-765 |
| Cow position: | chr25:16143888-16144330 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 331-765 |
| Cow position: | chr25:31537044-31537484 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 331-798 |
| Cow position: | chr25:12409418-12408959 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 332-764 |
| Cow position: | chr25:21158091-21157659 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 365-508 |
| Cow position: | chr25:12142786-12142646 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 365-508 |
| Cow position: | chr25:23205654-23205512 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 365-1000 |
| Cow position: | chr25:8547742-8547110 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 366-579 |
| Cow position: | chr25:18563638-18563422 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 152 |
| Conread position: | 366-776 |
| Cow position: | chr25:16116856-16117249 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 183, 25 |
| Conread position: | 389-596 |
| Cow position: | chr25:11408750-11408956 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 429-620 |
| Cow position: | chr25:13733764-13733951 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 429-765 |
| Cow position: | chr25:7511606-7511937 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 151 |
| Conread position: | 483-684 |
| Cow position: | chr25:15447016-15447214 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 143 |
| Conread position: | 491-752 |
| Cow position: | chr25:15478302-15478564 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 491-753 |
| Cow position: | chr25:12090080-12089832 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 492-765 |
| Cow position: | chr25:14939380-14939653 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 577-765 |
| Cow position: | chr25:13250335-13250522 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 142, 48 |
| Conread position: | 656-765 |
| Cow position: | chr25:13734119-13734229 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.