Cow genome map

Conread name: Ss1.1-Utr1-UTR010070E04.5

Conread position: 305-567
Cow position: chr3:29496956-29497220 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 122

Conread position: 321-574
Cow position: chr3:75117548-75117798 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 104

Conread position: 326-761
Cow position: chr3:548643-548227 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 281
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 43

Conread position: 326-776
Cow position: chr3:81527032-81527473 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 327-523
Cow position: chr3:60536076-60535876 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 124

Conread position: 327-972
Cow position: chr3:51415212-51414606 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 425
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 111

Conread position: 328-500
Cow position: chr3:14767858-14767684 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 329-715
Cow position: chr3:28717248-28716866 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 98

Conread position: 329-759
Cow position: chr3:19227811-19227385 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 329-765
Cow position: chr3:13508808-13508371 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 120

Conread position: 330-567
Cow position: chr3:6887069-6887309 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 114

Conread position: 330-1000
Cow position: chr3:32197859-32198516 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 104

Conread position: 331-492
Cow position: chr3:41407632-41407795 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 59

Conread position: 331-696
Cow position: chr3:43621077-43620721 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 331-696
Cow position: chr3:73427669-73427320 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 331-739
Cow position: chr3:26803004-26803414 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 120

Conread position: 331-749
Cow position: chr3:83998751-83998345 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 331-755
Cow position: chr3:48516919-48517342 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 139

Conread position: 331-770
Cow position: chr3:74407087-74406654 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 295
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 34

Conread position: 331-935
Cow position: chr3:69809964-69810550 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 381
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 39

Conread position: 331-969
Cow position: chr3:553022-552385 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 182

Conread position: 332-776
Cow position: chr3:54564008-54563588 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 98

Conread position: 337-579
Cow position: chr3:9188448-9188204 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 112

Conread position: 337-588
Cow position: chr3:6534665-6534412 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 130

Conread position: 337-767
Cow position: chr3:62740445-62740032 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 111

Conread position: 365-762
Cow position: chr3:84871770-84872148 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 32

Conread position: 376-749
Cow position: chr3:59298678-59298331 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 343, 97

Conread position: 390-701
Cow position: chr3:29309117-29309413 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 54

Conread position: 404-828
Cow position: chr3:11134691-11135097 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 25

Conread position: 405-765
Cow position: chr3:34233135-34233473 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 146, 38

Conread position: 414-750
Cow position: chr3:79197563-79197911 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 14

Conread position: 426-776
Cow position: chr3:60492517-60492187 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 21

Conread position: 428-737
Cow position: chr3:3253233-3253547 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 21

Conread position: 428-838
Cow position: chr3:2810581-2810980 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 16

Conread position: 429-757
Cow position: chr3:19958031-19958350 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 11

Conread position: 483-763
Cow position: chr3:30961235-30960948 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 141

Conread position: 485-998
Cow position: chr3:14767496-14766969 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 77

Conread position: 502-695
Cow position: chr3:27887917-27888107 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 122

Conread position: 517-734
Cow position: chr3:52853613-52853828 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 45

Conread position: 598-766
Cow position: chr3:39204529-39204691 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 25

Conread position: 604-738
Cow position: chr3:75117795-75117925 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 19

Conread position: 606-765
Cow position: chr3:29308715-29308873 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 13

Conread position: 654-1000
Cow position: chr3:11196480-11196832 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 181, 93

Show alignments to all cow chromosomes.