Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 306-765 |
| Cow position: | chr4:17640106-17640551 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 325-957 |
| Cow position: | chr4:43404117-43404705 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 415 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 326-765 |
| Cow position: | chr4:43705675-43705243 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 330-753 |
| Cow position: | chr4:23686802-23686379 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 225 |
| Conread position: | 331-579 |
| Cow position: | chr4:68407498-68407251 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 331-764 |
| Cow position: | chr4:34914151-34914582 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 331-765 |
| Cow position: | chr4:63540829-63541258 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 345-579 |
| Cow position: | chr4:11011540-11011775 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 138, 100 |
| Conread position: | 365-680 |
| Cow position: | chr4:26692268-26692575 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 365-765 |
| Cow position: | chr4:35583751-35583374 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 407-771 |
| Cow position: | chr4:32300650-32301008 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 72 |
| Conread position: | 414-749 |
| Cow position: | chr4:44131629-44131968 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 414-765 |
| Cow position: | chr4:7175838-7176185 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 414-1003 |
| Cow position: | chr4:13391299-13390715 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 427-755 |
| Cow position: | chr4:45940412-45940735 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 434-875 |
| Cow position: | chr4:64163456-64163017 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 445-765 |
| Cow position: | chr4:566009-566340 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 458-765 |
| Cow position: | chr4:20329023-20328725 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 93, 104 |
| Conread position: | 479-718 |
| Cow position: | chr4:34270190-34269954 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 483-1015 |
| Cow position: | chr4:37647351-37647865 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 536-1002 |
| Cow position: | chr4:66013611-66014069 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 561-758 |
| Cow position: | chr4:205774-205582 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 160, 59 |
| Conread position: | 628-758 |
| Cow position: | chr4:23086511-23086638 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 743-947 |
| Cow position: | chr4:23686168-23685964 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 743-1006 |
| Cow position: | chr4:27765907-27765642 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
Show alignments to all cow chromosomes.