Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 317-741 |
| Cow position: | chr5:50583149-50583572 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 326-584 |
| Cow position: | chr5:56623416-56623674 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 327-798 |
| Cow position: | chr5:36670380-36669922 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 331-584 |
| Cow position: | chr5:72590857-72590604 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 331-750 |
| Cow position: | chr5:63407830-63408228 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 331-765 |
| Cow position: | chr5:3578876-3578441 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 331-765 |
| Cow position: | chr5:29572186-29571754 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 268 |
| Conread position: | 331-765 |
| Cow position: | chr5:31569951-31569518 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 155 |
| Conread position: | 331-776 |
| Cow position: | chr5:48478949-48478529 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 337-765 |
| Cow position: | chr5:73572845-73572424 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 345-765 |
| Cow position: | chr5:52002808-52003217 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 188 |
| Conread position: | 350-936 |
| Cow position: | chr5:9501325-9501892 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 25 |
| Conread position: | 365-762 |
| Cow position: | chr5:44877801-44878187 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 366-713 |
| Cow position: | chr5:42714493-42714172 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 366-765 |
| Cow position: | chr5:63141979-63142366 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 67 |
| Conread position: | 376-719 |
| Cow position: | chr5:63307958-63308293 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 386-765 |
| Cow position: | chr5:57485023-57484659 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 40 |
| Conread position: | 399-777 |
| Cow position: | chr5:44134827-44134464 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 150, 49 |
| Conread position: | 405-765 |
| Cow position: | chr5:48135046-48135404 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 427-750 |
| Cow position: | chr5:55715490-55715167 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 428-755 |
| Cow position: | chr5:30643728-30643404 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 428-776 |
| Cow position: | chr5:48284053-48284401 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 433-684 |
| Cow position: | chr5:32043278-32043521 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 436-765 |
| Cow position: | chr5:51171680-51172006 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 444-770 |
| Cow position: | chr5:17848272-17848600 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 78 |
| Conread position: | 459-734 |
| Cow position: | chr5:62026435-62026158 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 35, 19 |
Show alignments to all cow chromosomes.