Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 327-579 |
| Cow position: | chr6:35118878-35118629 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 327-798 |
| Cow position: | chr6:25810562-25810094 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 271 |
| Conread position: | 328-620 |
| Cow position: | chr6:29334206-29334501 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 331-567 |
| Cow position: | chr6:27998595-27998833 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 331-1006 |
| Cow position: | chr6:3945709-3945015 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 332-701 |
| Cow position: | chr6:57341870-57341513 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 337-620 |
| Cow position: | chr6:432426-432707 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 338-713 |
| Cow position: | chr6:43633336-43633693 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 365-695 |
| Cow position: | chr6:6811928-6812244 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 185, 48 |
| Conread position: | 365-764 |
| Cow position: | chr6:19443831-19443456 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 15 |
| Conread position: | 365-771 |
| Cow position: | chr6:34023789-34023398 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 77 |
| Conread position: | 365-1000 |
| Cow position: | chr6:6380337-6379724 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 403 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 368-776 |
| Cow position: | chr6:24303863-24304254 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 191, 79 |
| Conread position: | 373-730 |
| Cow position: | chr6:57964857-57965211 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 387-762 |
| Cow position: | chr6:67728-68098 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 429-761 |
| Cow position: | chr6:42930151-42929837 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 446-1021 |
| Cow position: | chr6:3900039-3899482 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 6 |
| Conread position: | 448-765 |
| Cow position: | chr6:766030-766336 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 459-763 |
| Cow position: | chr6:44611160-44610846 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 481-776 |
| Cow position: | chr6:42988728-42989012 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 583-765 |
| Cow position: | chr6:16610163-16609983 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 593-765 |
| Cow position: | chr6:16639430-16639262 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 701-919 |
| Cow position: | chr6:35548671-35548456 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 33 |
Show alignments to all cow chromosomes.