Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 311-930 |
| Cow position: | chr9:51768142-51767530 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 417 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 326-776 |
| Cow position: | chr9:6269047-6269490 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 327-953 |
| Cow position: | chr9:30110882-30111463 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 397 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 328-583 |
| Cow position: | chr9:11424916-11425171 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 328-752 |
| Cow position: | chr9:1870445-1870859 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 21 |
| Conread position: | 329-776 |
| Cow position: | chr9:53332363-53332789 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 331-710 |
| Cow position: | chr9:48070631-48070248 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 337-584 |
| Cow position: | chr9:61140167-61139921 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 337-953 |
| Cow position: | chr9:41006022-41005428 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 71 |
| Conread position: | 345-749 |
| Cow position: | chr9:3380451-3380846 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 355-567 |
| Cow position: | chr9:7148363-7148152 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 196, 89 |
| Conread position: | 358-567 |
| Cow position: | chr9:17938129-17938335 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 188, 45 |
| Conread position: | 365-770 |
| Cow position: | chr9:31545335-31544938 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 365-776 |
| Cow position: | chr9:61446109-61445717 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 369-763 |
| Cow position: | chr9:20455458-20455085 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 55 |
| Conread position: | 425-662 |
| Cow position: | chr9:36679807-36680035 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 426-755 |
| Cow position: | chr9:38683643-38683968 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 432-764 |
| Cow position: | chr9:51888472-51888792 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 555-763 |
| Cow position: | chr9:55158499-55158298 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 654-801 |
| Cow position: | chr9:34068304-34068155 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.