Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010070E04.5 |
| Conread position: | 301-696 |
| Cow position: | chrX:37125421-37125035 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 323-741 |
| Cow position: | chrX:21245706-21246122 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 304 |
| Conread position: | 327-686 |
| Cow position: | chrX:40312572-40312213 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 328-567 |
| Cow position: | chrX:18080783-18080543 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 328-1000 |
| Cow position: | chrX:15370474-15371116 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 329-765 |
| Cow position: | chrX:46566987-46566560 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 331-621 |
| Cow position: | chrX:43713501-43713794 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 331-765 |
| Cow position: | chrX:3203103-3202671 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 331-776 |
| Cow position: | chrX:28859349-28858927 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 359-923 |
| Cow position: | chrX:38535453-38534921 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 189, 66 |
| Conread position: | 366-505 |
| Cow position: | chrX:19047054-19047191 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 459-682 |
| Cow position: | chrX:29426969-29427184 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 466-967 |
| Cow position: | chrX:11469867-11470355 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 28 |
| Conread position: | 475-736 |
| Cow position: | chrX:43321109-43321368 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 76, 131 |
| Conread position: | 481-765 |
| Cow position: | chrX:38072437-38072718 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 70, 143 |
| Conread position: | 612-765 |
| Cow position: | chrX:12262484-12262640 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 667-919 |
| Cow position: | chrX:18080476-18080230 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 694-955 |
| Cow position: | chrX:37124649-37124389 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 140, 101 |
Show alignments to all cow chromosomes.