Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 19-635 |
| Cow position: | chr14:23691980-23691369 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 394 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 29-396 |
| Cow position: | chr14:22242089-22242463 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 29-441 |
| Cow position: | chr14:42150777-42151204 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 29-444 |
| Cow position: | chr14:44857712-44857281 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 141, 72 |
| Conread position: | 29-473 |
| Cow position: | chr14:42403122-42403579 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 29-635 |
| Cow position: | chr14:41086556-41085952 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 392 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 29-635 |
| Cow position: | chr14:45713722-45713121 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 397 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 29-643 |
| Cow position: | chr14:47622826-47623426 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 397 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 30-214 |
| Cow position: | chr14:44224585-44224772 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 30-302 |
| Cow position: | chr14:33434336-33434056 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 30-456 |
| Cow position: | chr14:44421273-44421698 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 31-506 |
| Cow position: | chr14:44550294-44550773 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 31-828 |
| Cow position: | chr14:46082806-46083602 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 32-454 |
| Cow position: | chr14:37415301-37414867 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 34-456 |
| Cow position: | chr14:40337885-40338318 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 48-504 |
| Cow position: | chr14:45505747-45505281 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 52-828 |
| Cow position: | chr14:45305433-45304659 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 57-450 |
| Cow position: | chr14:45534150-45533753 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 60-643 |
| Cow position: | chr14:1498255-1498828 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 377 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 190, 41 |
| Conread position: | 71-330 |
| Cow position: | chr14:45849543-45849800 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 80-445 |
| Cow position: | chr14:35389173-35388798 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 86, 25 |
| Conread position: | 94-445 |
| Cow position: | chr14:41771225-41771576 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 98-451 |
| Cow position: | chr14:36966089-36966452 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 113 |
| Conread position: | 161-648 |
| Cow position: | chr14:45766420-45766894 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 268 |
| Conread position: | 442-715 |
| Cow position: | chr14:45159407-45159684 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 448-828 |
| Cow position: | chr14:40338288-40338668 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 475-828 |
| Cow position: | chr14:50133538-50133888 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 515-761 |
| Cow position: | chr14:41771618-41771864 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 518-752 |
| Cow position: | chr14:35388747-35388509 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 527-826 |
| Cow position: | chr14:45204755-45205051 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 43 |
Show alignments to all cow chromosomes.