Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 19-636 |
| Cow position: | chr15:17273106-17272496 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 399 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 26-326 |
| Cow position: | chr15:35746591-35746895 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 29-330 |
| Cow position: | chr15:6372591-6372291 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 221, 15 |
| Conread position: | 29-444 |
| Cow position: | chr15:4731328-4731745 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 29-471 |
| Cow position: | chr15:23159036-23158612 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 316, 46 |
| Conread position: | 29-518 |
| Cow position: | chr15:6183412-6183915 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 29-635 |
| Cow position: | chr15:36647162-36647767 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 29-646 |
| Cow position: | chr15:4666607-4667222 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 30-528 |
| Cow position: | chr15:3039252-3038742 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 31-219 |
| Cow position: | chr15:45189344-45189535 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 31-441 |
| Cow position: | chr15:25791212-25790793 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 70 |
| Conread position: | 31-444 |
| Cow position: | chr15:6651991-6651565 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 31-809 |
| Cow position: | chr15:32681390-32680601 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 32-363 |
| Cow position: | chr15:21818326-21817987 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 32-497 |
| Cow position: | chr15:7895944-7895470 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 32-828 |
| Cow position: | chr15:35650011-35649218 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 38-256 |
| Cow position: | chr15:16592151-16591934 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 22 |
| Conread position: | 48-473 |
| Cow position: | chr15:3650585-3651028 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 53 |
| Conread position: | 50-443 |
| Cow position: | chr15:6077022-6077423 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 57-619 |
| Cow position: | chr15:4793961-4794507 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 44 |
| Conread position: | 58-376 |
| Cow position: | chr15:24792335-24792643 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 192, 42 |
| Conread position: | 91-468 |
| Cow position: | chr15:29289053-29288674 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 113-712 |
| Cow position: | chr15:36628897-36628310 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 380 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 118-417 |
| Cow position: | chr15:27066527-27066236 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 126-733 |
| Cow position: | chr15:36640975-36641577 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 176 |
| Conread position: | 324-828 |
| Cow position: | chr15:16591648-16591122 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 494-808 |
| Cow position: | chr15:32692182-32692495 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 515-815 |
| Cow position: | chr15:38958468-38958176 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 171, 87 |
| Conread position: | 519-828 |
| Cow position: | chr15:7932653-7932967 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 527-808 |
| Cow position: | chr15:21817644-21817363 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 551-809 |
| Cow position: | chr15:2923224-2923485 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 574-828 |
| Cow position: | chr15:24792782-24793040 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 156 |
Show alignments to all cow chromosomes.