Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 21-808 |
| Cow position: | chr17:15369507-15370279 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 77 |
| Conread position: | 23-635 |
| Cow position: | chr17:23842453-23843061 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 29-444 |
| Cow position: | chr17:2286037-2286461 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 29-518 |
| Cow position: | chr17:22432361-22431863 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 30 |
| Conread position: | 29-635 |
| Cow position: | chr17:32025708-32025111 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 389 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 30-456 |
| Cow position: | chr17:20089394-20088968 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 30-463 |
| Cow position: | chr17:1285265-1284822 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 30-518 |
| Cow position: | chr17:44854423-44853933 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 30-655 |
| Cow position: | chr17:56201-55576 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 31-445 |
| Cow position: | chr17:1774088-1774503 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 70 |
| Conread position: | 31-468 |
| Cow position: | chr17:31202268-31201814 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 32-635 |
| Cow position: | chr17:23858717-23858116 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 391 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 32-786 |
| Cow position: | chr17:14327881-14327150 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 32-791 |
| Cow position: | chr17:3695391-3694626 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 353 |
| Conread position: | 41-468 |
| Cow position: | chr17:156439-156012 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 53-511 |
| Cow position: | chr17:35590766-35591221 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 190 |
| Conread position: | 66-363 |
| Cow position: | chr17:36798459-36798155 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 111-436 |
| Cow position: | chr17:1535494-1535158 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 526-802 |
| Cow position: | chr17:15416182-15416463 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 128 |
Show alignments to all cow chromosomes.