Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 17-808 |
| Cow position: | chr22:41421268-41420464 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 26-456 |
| Cow position: | chr22:39883609-39883168 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 28-329 |
| Cow position: | chr22:37735399-37735707 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 29-330 |
| Cow position: | chr22:37145819-37146124 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 143, 10 |
| Conread position: | 29-416 |
| Cow position: | chr22:36535278-36534884 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 141, 72 |
| Conread position: | 29-518 |
| Cow position: | chr22:37139906-37140400 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 29-617 |
| Cow position: | chr22:1314072-1313468 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 30-246 |
| Cow position: | chr22:46545245-46545462 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 30-451 |
| Cow position: | chr22:32489025-32488593 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 30-588 |
| Cow position: | chr22:3308417-3307872 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 30-660 |
| Cow position: | chr22:42770150-42770770 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 399 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 30-827 |
| Cow position: | chr22:8879791-8880566 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 30-828 |
| Cow position: | chr22:9464021-9464793 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 31-274 |
| Cow position: | chr22:6088695-6088448 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 31-828 |
| Cow position: | chr22:11029195-11029974 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 32-398 |
| Cow position: | chr22:1318025-1318401 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 32-466 |
| Cow position: | chr22:36733717-36734157 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 139, 69 |
| Conread position: | 32-635 |
| Cow position: | chr22:5671335-5671937 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 32-808 |
| Cow position: | chr22:6505330-6504548 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 38-619 |
| Cow position: | chr22:40379821-40380397 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 48-498 |
| Cow position: | chr22:32481884-32481430 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 48-828 |
| Cow position: | chr22:1294965-1294171 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 59-690 |
| Cow position: | chr22:34695066-34695726 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 92-754 |
| Cow position: | chr22:1286338-1285668 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 111-619 |
| Cow position: | chr22:119133-118628 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 126-364 |
| Cow position: | chr22:17072252-17072490 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 130-466 |
| Cow position: | chr22:8137568-8137220 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 41, 229 |
| Conread position: | 207-614 |
| Cow position: | chr22:8741585-8741173 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 208-808 |
| Cow position: | chr22:1271760-1271155 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 250-578 |
| Cow position: | chr22:1317539-1317867 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 258-815 |
| Cow position: | chr22:45881334-45880787 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 373-789 |
| Cow position: | chr22:17072722-17073142 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 120 |
| Conread position: | 568-808 |
| Cow position: | chr22:46636902-46636663 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 594-828 |
| Cow position: | chr22:3307638-3307400 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 631-826 |
| Cow position: | chr22:1320740-1320935 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 30 |
Show alignments to all cow chromosomes.