Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR01D120094.5
        

               Conread position:
               29-656
               

               Cow position:
               chr27:16437323-16437950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               405
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               143, 72
               

               Conread position:
               30-587
               

               Cow position:
               chr27:26557443-26556875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               30-594
               

               Cow position:
               chr27:16431078-16431634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               371
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               141, 71
               

               Conread position:
               30-655
               

               Cow position:
               chr27:15330613-15331266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               658
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               31-468
               

               Cow position:
               chr27:27306985-27307425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               32-451
               

               Cow position:
               chr27:31270105-31270527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               48-463
               

               Cow position:
               chr27:27050297-27050721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               169-763
               

               Cow position:
               chr27:25115933-25116548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 276
               

               Conread position:
               662-809
               

               Cow position:
               chr27:5060491-5060342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 54
               
Show alignments to all cow chromosomes.