Cow genome map

Conread name: Ss1.1-Utr1-UTR01D120094.5

Conread position: 12-454
Cow position:
Alignm length: 463
Alignm identity: 306
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 92

Conread position: 29-214
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 72

Conread position: 29-451
Cow position:
Alignm length: 435
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 29-462
Cow position:
Alignm length: 448
Alignm identity: 292
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 72

Conread position: 30-425
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 65

Conread position: 30-476
Cow position:
Alignm length: 456
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 10

Conread position: 30-828
Cow position:
Alignm length: 817
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 30-828
Cow position:
Alignm length: 825
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 31-666
Cow position:
Alignm length: 653
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 32-408
Cow position:
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 33-363
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 71

Conread position: 33-566
Cow position:
Alignm length: 555
Alignm identity: 357
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 72

Conread position: 38-248
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 61

Conread position: 55-672
Cow position:
Alignm length: 631
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 46

Conread position: 57-449
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 64-828
Cow position:
Alignm length: 796
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 37

Conread position: 76-808
Cow position:
Alignm length: 763
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 25

Conread position: 116-733
Cow position:
Alignm length: 654
Alignm identity: 410
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 102

Conread position: 161-609
Cow position:
Alignm length: 464
Alignm identity: 299
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 14

Conread position: 244-433
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 7

Conread position: 251-808
Cow position:
Alignm length: 573
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 266-828
Cow position:
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 271-586
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 68

Conread position: 475-805
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 95

Conread position: 524-828
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 208

Conread position: 526-808
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 116

Conread position: 526-828
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 142, 70

Conread position: 554-828
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 48

Conread position: 597-809
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 675-807
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 49

Show alignments to all cow chromosomes.