Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 12-587 |
| Cow position: | chr8:51861164-51860592 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 20-544 |
| Cow position: | chr8:54825628-54825097 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 29-362 |
| Cow position: | chr8:24421960-24421615 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 29-444 |
| Cow position: | chr8:1584300-1584726 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 29-468 |
| Cow position: | chr8:39952314-39951859 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 29-518 |
| Cow position: | chr8:23215636-23216139 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 29-636 |
| Cow position: | chr8:45318254-45317655 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 30-345 |
| Cow position: | chr8:58187442-58187141 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 30-423 |
| Cow position: | chr8:38609199-38608790 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 30-454 |
| Cow position: | chr8:42163746-42163329 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 30-501 |
| Cow position: | chr8:21204518-21204991 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 30-531 |
| Cow position: | chr8:9541945-9541469 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 26 |
| Conread position: | 30-594 |
| Cow position: | chr8:30416765-30417321 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 30-619 |
| Cow position: | chr8:27092869-27092270 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 30-619 |
| Cow position: | chr8:47669304-47669884 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 30-828 |
| Cow position: | chr8:11756471-11757274 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 30-828 |
| Cow position: | chr8:11971802-11970995 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 31-364 |
| Cow position: | chr8:45162774-45162440 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 31-444 |
| Cow position: | chr8:27985184-27984759 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 41-667 |
| Cow position: | chr8:50751462-50752115 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 43-451 |
| Cow position: | chr8:44691916-44692332 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 57 |
| Conread position: | 64-243 |
| Cow position: | chr8:25540041-25540220 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 74-551 |
| Cow position: | chr8:61037436-61036956 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 91-468 |
| Cow position: | chr8:40573069-40572690 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 122-423 |
| Cow position: | chr8:12545464-12545166 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 167-471 |
| Cow position: | chr8:19228796-19229096 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 83, 173 |
| Conread position: | 175-460 |
| Cow position: | chr8:53423925-53424215 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 91, 158 |
| Conread position: | 199-619 |
| Cow position: | chr8:45188076-45188492 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 251-469 |
| Cow position: | chr8:42383691-42383468 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 297-828 |
| Cow position: | chr8:25540989-25541539 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 181 |
| Conread position: | 298-618 |
| Cow position: | chr8:46218976-46218655 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 55, 179 |
| Conread position: | 371-806 |
| Cow position: | chr8:45162395-45161972 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 519-826 |
| Cow position: | chr8:38608686-38608388 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 198, 77 |
| Conread position: | 526-807 |
| Cow position: | chr8:44692428-44692720 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 72, 207 |
| Conread position: | 527-793 |
| Cow position: | chr8:44121128-44121391 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 539-733 |
| Cow position: | chr8:9541153-9540957 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 646-808 |
| Cow position: | chr8:24421401-24421238 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 140 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 70, 81 |
| Conread position: | 657-806 |
| Cow position: | chr8:26623031-26623180 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 38 |
Show alignments to all cow chromosomes.