Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
| Conread position: | 18-446 |
| Cow position: | chr9:3154567-3155014 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 26-444 |
| Cow position: | chr9:8970546-8970128 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 28-302 |
| Cow position: | chr9:54113147-54113430 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 28-388 |
| Cow position: | chr9:31019299-31019668 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 28-606 |
| Cow position: | chr9:652617-652041 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 368 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 29-302 |
| Cow position: | chr9:3144518-3144234 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 29-302 |
| Cow position: | chr9:3149113-3148829 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 29-463 |
| Cow position: | chr9:10313910-10314351 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 141, 61 |
| Conread position: | 29-467 |
| Cow position: | chr9:15071062-15071512 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 30-441 |
| Cow position: | chr9:28627866-28627446 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 30-444 |
| Cow position: | chr9:29358492-29358920 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 30-448 |
| Cow position: | chr9:44794067-44794517 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 31-761 |
| Cow position: | chr9:13218630-13219400 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 32-246 |
| Cow position: | chr9:11320941-11321159 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 32-645 |
| Cow position: | chr9:833000-832380 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 32-785 |
| Cow position: | chr9:2006644-2005864 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 32-828 |
| Cow position: | chr9:3801948-3802738 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 33-246 |
| Cow position: | chr9:64006593-64006812 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 48-409 |
| Cow position: | chr9:54359363-54359726 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 60-364 |
| Cow position: | chr9:3585299-3585609 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 123-468 |
| Cow position: | chr9:2112449-2112804 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 168-451 |
| Cow position: | chr9:56863517-56863231 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 168-808 |
| Cow position: | chr9:18001825-18002453 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 185-468 |
| Cow position: | chr9:34109199-34108906 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 535-808 |
| Cow position: | chr9:11321418-11321687 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 61, 50 |
Show alignments to all cow chromosomes.