Cow genome map
Conread name: | Ss1.1-Utr1-UTR01D120094.5 |
Conread position: | 10-619 |
Cow position: | chrX:22776415-22777009 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 16 |
Conread position: | 19-389 |
Cow position: | chrX:29784904-29784528 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 247 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 165, 82 |
Conread position: | 20-444 |
Cow position: | chrX:21057876-21058312 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 287 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 41, 24 |
Conread position: | 21-635 |
Cow position: | chrX:6911369-6910754 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 83 |
Conread position: | 23-444 |
Cow position: | chrX:21599069-21599502 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 289 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 39, 81 |
Conread position: | 26-442 |
Cow position: | chrX:30047716-30047292 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 277 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 39, 78 |
Conread position: | 26-463 |
Cow position: | chrX:21291075-21290627 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 78 |
Conread position: | 28-504 |
Cow position: | chrX:26898245-26897780 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 306 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 144, 31 |
Conread position: | 29-328 |
Cow position: | chrX:20802472-20802776 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 215 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 28, 75 |
Conread position: | 29-444 |
Cow position: | chrX:30991552-30991127 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 276 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 142, 72 |
Conread position: | 29-444 |
Cow position: | chrX:35016201-35016629 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 29-445 |
Cow position: | chrX:24123694-24123267 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 288 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 31, 74 |
Conread position: | 29-451 |
Cow position: | chrX:39716207-39716648 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 292 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 32, 75 |
Conread position: | 29-456 |
Cow position: | chrX:13008220-13007783 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 75 |
Conread position: | 30-567 |
Cow position: | chrX:31033791-31034335 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 71 |
Conread position: | 30-619 |
Cow position: | chrX:24137994-24137406 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 78 |
Conread position: | 30-638 |
Cow position: | chrX:11670098-11669478 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 74 |
Conread position: | 30-648 |
Cow position: | chrX:25331476-25332090 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 49 |
Conread position: | 30-708 |
Cow position: | chrX:42451128-42450445 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 29 |
Conread position: | 30-828 |
Cow position: | chrX:21791034-21791833 (view UCSC Genome Browser custom track) |
Alignm length: | 813 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 31-444 |
Cow position: | chrX:21634165-21633737 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 75 |
Conread position: | 31-451 |
Cow position: | chrX:26503591-26504024 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 72 |
Conread position: | 31-619 |
Cow position: | chrX:8907463-8908034 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 382 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 30, 73 |
Conread position: | 31-828 |
Cow position: | chrX:35015217-35015997 (view UCSC Genome Browser custom track) |
Alignm length: | 815 |
Alignm identity: | 550 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 39 |
Conread position: | 32-387 |
Cow position: | chrX:17672516-17672149 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 253 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 32-454 |
Cow position: | chrX:30372017-30371594 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 266 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 23, 43 |
Conread position: | 32-672 |
Cow position: | chrX:22133615-22132960 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 408 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 25, 74 |
Conread position: | 33-828 |
Cow position: | chrX:6362472-6361644 (view UCSC Genome Browser custom track) |
Alignm length: | 838 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 70 |
Conread position: | 48-468 |
Cow position: | chrX:5836262-5835827 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 56 |
Conread position: | 58-643 |
Cow position: | chrX:26837659-26838237 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 364 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 71, 47 |
Conread position: | 58-670 |
Cow position: | chrX:35956256-35955623 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 43 |
Conread position: | 118-456 |
Cow position: | chrX:26633489-26633137 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 228 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 53, 198 |
Conread position: | 161-828 |
Cow position: | chrX:6284741-6284074 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 66 |
Conread position: | 174-645 |
Cow position: | chrX:30144980-30144497 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 319 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 76, 101 |
Conread position: | 208-808 |
Cow position: | chrX:28552520-28553125 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 167 |
Conread position: | 208-826 |
Cow position: | chrX:21585520-21586139 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 277 |
Conread position: | 251-828 |
Cow position: | chrX:2537865-2537293 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 50 |
Conread position: | 382-587 |
Cow position: | chrX:17670480-17670266 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 74, 98 |
Conread position: | 400-808 |
Cow position: | chrX:31371659-31372063 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 84 |
Conread position: | 440-828 |
Cow position: | chrX:25041688-25041304 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 275 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 7, 38 |
Conread position: | 553-827 |
Cow position: | chrX:31034548-31034826 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 205 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 45, 116 |
Conread position: | 622-815 |
Cow position: | chrX:16018205-16018012 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 92, 102 |
Conread position: | 657-819 |
Cow position: | chrX:17670006-17669844 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 19, 15 |
Show alignments to all cow chromosomes.