Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 1-190 |
| Cow position: | chr10:54126655-54126841 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-238 |
| Cow position: | chr10:61296479-61296715 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 17-226 |
| Cow position: | chr10:38547028-38546824 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 18-238 |
| Cow position: | chr10:39780655-39780433 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 176-657 |
| Cow position: | chr10:60488861-60489350 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 275-646 |
| Cow position: | chr10:14886535-14886174 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 57 |
| Conread position: | 275-646 |
| Cow position: | chr10:24299549-24299182 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 279-559 |
| Cow position: | chr10:49309853-49310131 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 178, 91 |
| Conread position: | 289-657 |
| Cow position: | chr10:14951045-14951398 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 173, 43 |
| Conread position: | 300-507 |
| Cow position: | chr10:42682811-42683019 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 306-498 |
| Cow position: | chr10:42663629-42663820 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 370-654 |
| Cow position: | chr10:4499104-4499392 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 85, 52 |
| Conread position: | 380-640 |
| Cow position: | chr10:29695651-29695929 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 383-656 |
| Cow position: | chr10:54126869-54127148 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 384-657 |
| Cow position: | chr10:46190795-46191067 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 161, 66 |
| Conread position: | 392-632 |
| Cow position: | chr10:62216032-62216281 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 121 |
| Conread position: | 392-632 |
| Cow position: | chr10:62777773-62778016 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 392-640 |
| Cow position: | chr10:25497781-25498037 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 120 |
| Conread position: | 392-640 |
| Cow position: | chr10:29633410-29633165 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 392-640 |
| Cow position: | chr10:34685326-34685578 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 120 |
| Conread position: | 392-651 |
| Cow position: | chr10:42627881-42628155 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 392-655 |
| Cow position: | chr10:61296714-61296982 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 394-559 |
| Cow position: | chr10:31523283-31523453 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 403-666 |
| Cow position: | chr10:34318822-34318570 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 436-655 |
| Cow position: | chr10:14859450-14859661 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 109, 46 |
Show alignments to all cow chromosomes.