Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 41-225 |
| Cow position: | chr13:20543422-20543238 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 220-657 |
| Cow position: | chr13:48356281-48356717 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 275-666 |
| Cow position: | chr13:34768196-34767827 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 173, 88 |
| Conread position: | 276-514 |
| Cow position: | chr13:5282865-5283100 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 289-564 |
| Cow position: | chr13:47859350-47859631 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 292-648 |
| Cow position: | chr13:15081141-15080796 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 159, 39 |
| Conread position: | 338-640 |
| Cow position: | chr13:33279266-33278977 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 142, 30 |
| Conread position: | 350-657 |
| Cow position: | chr13:20543275-20542978 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 376-611 |
| Cow position: | chr13:3276268-3276512 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 379-552 |
| Cow position: | chr13:13046691-13046516 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 132 |
| Conread position: | 380-627 |
| Cow position: | chr13:34692293-34692544 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 134 |
| Conread position: | 380-640 |
| Cow position: | chr13:34143526-34143273 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 134 |
| Conread position: | 381-640 |
| Cow position: | chr13:33825624-33825351 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 137 |
| Conread position: | 390-640 |
| Cow position: | chr13:62328451-62328193 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 120 |
| Conread position: | 392-559 |
| Cow position: | chr13:34935979-34936150 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 392-640 |
| Cow position: | chr13:2909310-2909058 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 120 |
| Conread position: | 395-650 |
| Cow position: | chr13:58716130-58716376 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 397-645 |
| Cow position: | chr13:31831746-31832001 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 75, 115 |
| Conread position: | 404-639 |
| Cow position: | chr13:34187554-34187318 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 469-657 |
| Cow position: | chr13:54283794-54283978 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 40 |
Show alignments to all cow chromosomes.