Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 1-238 |
| Cow position: | chr19:39687223-39687458 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 1-656 |
| Cow position: | chr19:32224363-32223709 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 275-477 |
| Cow position: | chr19:8229991-8229789 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 193, 95 |
| Conread position: | 275-549 |
| Cow position: | chr19:20124988-20125252 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 263, 70 |
| Conread position: | 303-656 |
| Cow position: | chr19:562353-562002 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 172, 65 |
| Conread position: | 322-559 |
| Cow position: | chr19:7341412-7341649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 187 |
| Conread position: | 325-657 |
| Cow position: | chr19:6552786-6553110 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 335-666 |
| Cow position: | chr19:36476747-36477071 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 35 |
| Conread position: | 367-552 |
| Cow position: | chr19:32238418-32238230 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 380-548 |
| Cow position: | chr19:24748375-24748548 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 380-640 |
| Cow position: | chr19:801431-801696 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 380-640 |
| Cow position: | chr19:4252921-4252652 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 390-640 |
| Cow position: | chr19:416104-416354 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 390-640 |
| Cow position: | chr19:29209012-29209272 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 392-656 |
| Cow position: | chr19:33860-34124 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 394-633 |
| Cow position: | chr19:27053381-27053145 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 395-657 |
| Cow position: | chr19:76799-76530 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 403-657 |
| Cow position: | chr19:35376019-35376269 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 405-640 |
| Cow position: | chr19:39546126-39546363 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 134, 102 |
Show alignments to all cow chromosomes.