Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 1-175 |
| Cow position: | chr22:17072970-17073142 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 1-233 |
| Cow position: | chr22:1294380-1294152 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 17-187 |
| Cow position: | chr22:45880968-45880799 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 192-478 |
| Cow position: | chr22:34695747-34696027 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 185 |
| Conread position: | 279-576 |
| Cow position: | chr22:36272743-36273040 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 52 |
| Conread position: | 279-657 |
| Cow position: | chr22:7276756-7277125 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 91 |
| Conread position: | 286-573 |
| Cow position: | chr22:36266637-36266926 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 178, 79 |
| Conread position: | 289-504 |
| Cow position: | chr22:27334721-27334927 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 186, 10 |
| Conread position: | 299-576 |
| Cow position: | chr22:308997-309269 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 299-658 |
| Cow position: | chr22:33350430-33350773 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 336-555 |
| Cow position: | chr22:1624367-1624572 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 377-632 |
| Cow position: | chr22:39882832-39882575 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 132 |
| Conread position: | 380-568 |
| Cow position: | chr22:1318759-1318948 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 130 |
| Conread position: | 383-640 |
| Cow position: | chr22:1294165-1293904 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 386-656 |
| Cow position: | chr22:1046725-1046989 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 387-558 |
| Cow position: | chr22:44353808-44353634 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 127 |
| Conread position: | 390-648 |
| Cow position: | chr22:3307379-3307116 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 392-627 |
| Cow position: | chr22:42770915-42771139 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 392-657 |
| Cow position: | chr22:1285592-1285326 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 407-648 |
| Cow position: | chr22:45880755-45880520 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 38 |
Show alignments to all cow chromosomes.