Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 1-185 |
| Cow position: | chr4:1465244-1465063 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 5-648 |
| Cow position: | chr4:54954641-54955301 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 171 |
| Conread position: | 55-209 |
| Cow position: | chr4:21339087-21338933 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 143, 111 |
| Conread position: | 69-222 |
| Cow position: | chr4:28829954-28830107 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 89 |
| Conread position: | 76-511 |
| Cow position: | chr4:1465105-1464688 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 279-652 |
| Cow position: | chr4:58883704-58883337 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 289-571 |
| Cow position: | chr4:21563942-21564223 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 179, 62 |
| Conread position: | 324-648 |
| Cow position: | chr4:21358678-21358994 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 350-646 |
| Cow position: | chr4:28830080-28830366 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 170 |
| Conread position: | 380-643 |
| Cow position: | chr4:66925079-66925351 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 388-646 |
| Cow position: | chr4:51044810-51044553 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 157, 25 |
| Conread position: | 388-667 |
| Cow position: | chr4:60631163-60630894 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 158, 80 |
| Conread position: | 388-667 |
| Cow position: | chr4:60672980-60673258 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 390-657 |
| Cow position: | chr4:21338913-21338641 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 124 |
| Conread position: | 392-616 |
| Cow position: | chr4:1371908-1371683 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 398-648 |
| Cow position: | chr4:34185773-34185523 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 404-571 |
| Cow position: | chr4:8599033-8598867 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 141, 105 |
Show alignments to all cow chromosomes.