Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 17-238 |
| Cow position: | chr6:6477356-6477134 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 17-278 |
| Cow position: | chr6:4905087-4904825 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 163 |
| Conread position: | 40-657 |
| Cow position: | chr6:65900932-65900334 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 138 |
| Conread position: | 93-238 |
| Cow position: | chr6:47958251-47958398 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 143-507 |
| Cow position: | chr6:10639726-10640089 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 275-407 |
| Cow position: | chr6:10053810-10053944 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 278-656 |
| Cow position: | chr6:7180458-7180091 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 184, 92 |
| Conread position: | 279-526 |
| Cow position: | chr6:52803646-52803890 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 182, 91 |
| Conread position: | 279-657 |
| Cow position: | chr6:37477438-37477817 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 191, 100 |
| Conread position: | 300-655 |
| Cow position: | chr6:4904826-4904477 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 68 |
| Conread position: | 336-648 |
| Cow position: | chr6:66538592-66538892 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 13 |
| Conread position: | 379-654 |
| Cow position: | chr6:10053942-10054210 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 380-565 |
| Cow position: | chr6:13275886-13276077 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 380-640 |
| Cow position: | chr6:42926703-42926958 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 380-657 |
| Cow position: | chr6:11278394-11278118 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 386-657 |
| Cow position: | chr6:38231571-38231854 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 139 |
| Conread position: | 392-639 |
| Cow position: | chr6:10559301-10559061 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 129 |
| Conread position: | 392-655 |
| Cow position: | chr6:12093542-12093280 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 403-649 |
| Cow position: | chr6:47958404-47958651 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 134, 62 |
| Conread position: | 434-611 |
| Cow position: | chr6:35421321-35421143 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 56 |
Show alignments to all cow chromosomes.