Cow genome map
| Conread name: | Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5 |
| Conread position: | 613-835 |
| Cow position: | chr11:4435635-4435411 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 613-1053 |
| Cow position: | chr11:21569691-21570142 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 200, 7 |
| Conread position: | 613-1082 |
| Cow position: | chr11:64469782-64469303 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 44 |
| Conread position: | 616-1001 |
| Cow position: | chr11:29810984-29810599 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 617-1056 |
| Cow position: | chr11:56290023-56289603 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 267, 40 |
| Conread position: | 618-924 |
| Cow position: | chr11:36203680-36203971 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 192, 12 |
| Conread position: | 620-1060 |
| Cow position: | chr11:68267200-68266755 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 305 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 627-923 |
| Cow position: | chr11:64167537-64167236 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 142, 31 |
| Conread position: | 640-870 |
| Cow position: | chr11:77014913-77014684 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 640-1065 |
| Cow position: | chr11:47981355-47981781 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 653-991 |
| Cow position: | chr11:39488763-39488434 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 230, 11 |
| Conread position: | 671-1036 |
| Cow position: | chr11:41361660-41362018 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 794-1054 |
| Cow position: | chr11:15169672-15169422 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 798-1295 |
| Cow position: | chr11:45690847-45691360 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 274 |
| Conread position: | 810-1060 |
| Cow position: | chr11:73008911-73009169 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 28 |
Show alignments to all cow chromosomes.