Cow genome map


           Conread name:
           Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5
        

               Conread position:
               607-1034
               

               Cow position:
               chr15:35189987-35189561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               172, 27
               

               Conread position:
               613-1057
               

               Cow position:
               chr15:596357-595908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               613-1295
               

               Cow position:
               chr15:22783088-22782378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               723
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 57
               

               Conread position:
               616-928
               

               Cow position:
               chr15:6859686-6859379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               164, 11
               

               Conread position:
               616-1056
               

               Cow position:
               chr15:25755326-25754883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               307
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               616-1057
               

               Cow position:
               chr15:23345465-23345034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 41
               

               Conread position:
               621-755
               

               Cow position:
               chr15:41896571-41896702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               629-1111
               

               Cow position:
               chr15:21595267-21594770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               330
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               151, 28
               

               Conread position:
               634-1056
               

               Cow position:
               chr15:26887924-26887488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               736-1056
               

               Cow position:
               chr15:50925519-50925855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               787-1082
               

               Cow position:
               chr15:49007747-49007437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               850-1296
               

               Cow position:
               chr15:3604344-3603878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 54
               
Show alignments to all cow chromosomes.