Cow genome map


           Conread name:
           Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5
        

               Conread position:
               610-1056
               

               Cow position:
               chr16:13112074-13111624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 40
               

               Conread position:
               613-942
               

               Cow position:
               chr16:45820320-45819998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               206, 27
               

               Conread position:
               613-983
               

               Cow position:
               chr16:54484441-54484067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               167, 44
               

               Conread position:
               616-1037
               

               Cow position:
               chr16:42286853-42286428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               189, 41
               

               Conread position:
               629-903
               

               Cow position:
               chr16:44923330-44923053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               862-1061
               

               Cow position:
               chr16:52576999-52577205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 110
               
Show alignments to all cow chromosomes.