Cow genome map


           Conread name:
           Ss1.1-raor015_j22.5
        

               Conread position:
               525-859
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 174
               

               Conread position:
               551-923
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 66
               

               Conread position:
               552-741
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               552-806
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               553-918
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               557-693
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               557-902
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               557-918
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               51, 180
               

               Conread position:
               557-924
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               558-703
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 96
               

               Conread position:
               558-806
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               172, 68
               

               Conread position:
               558-812
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               558-921
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 199
               

               Conread position:
               558-923
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               558-923
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 99
               

               Conread position:
               564-806
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               591-921
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               595-879
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               40, 163
               

               Conread position:
               708-923
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               718-922
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               724-924
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               759-920
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 129
               

               Conread position:
               759-922
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               49, 112
               

               Conread position:
               759-922
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               759-923
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               760-924
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               761-905
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               761-918
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               761-920
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               761-922
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 130
               

               Conread position:
               762-922
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               762-923
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               779-921
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.