Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 549-905 |
| Cow position: | chr13:52281979-52282334 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 550-906 |
| Cow position: | chr13:28091264-28091619 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 552-725 |
| Cow position: | chr13:646366-646189 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 552-746 |
| Cow position: | chr13:15591180-15591383 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 555-813 |
| Cow position: | chr13:12485060-12484799 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 36, 199 |
| Conread position: | 556-797 |
| Cow position: | chr13:14699577-14699321 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 558-804 |
| Cow position: | chr13:35752067-35751830 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 558-806 |
| Cow position: | chr13:56680687-56680447 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 156 |
| Conread position: | 560-917 |
| Cow position: | chr13:31495153-31494794 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 560-924 |
| Cow position: | chr13:41843537-41843163 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 109 |
| Conread position: | 561-923 |
| Cow position: | chr13:61030669-61031042 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 195 |
| Conread position: | 566-918 |
| Cow position: | chr13:19546089-19546456 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 189 |
| Conread position: | 587-922 |
| Cow position: | chr13:61895281-61894937 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 596-805 |
| Cow position: | chr13:34348786-34348573 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 36, 158 |
| Conread position: | 596-918 |
| Cow position: | chr13:38463262-38463591 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 603-918 |
| Cow position: | chr13:60312687-60312353 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 655-924 |
| Cow position: | chr13:16571134-16570863 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 94 |
| Conread position: | 762-921 |
| Cow position: | chr13:22946450-22946607 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 762-921 |
| Cow position: | chr13:45304860-45305024 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 763-923 |
| Cow position: | chr13:53161396-53161556 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 767-923 |
| Cow position: | chr13:43360402-43360562 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 117 |
Show alignments to all cow chromosomes.