Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 548-723 |
| Cow position: | chr14:40013664-40013846 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 557-770 |
| Cow position: | chr14:7951129-7950909 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 33, 200 |
| Conread position: | 558-749 |
| Cow position: | chr14:48395175-48395370 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 558-797 |
| Cow position: | chr14:49272865-49272627 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 70, 7 |
| Conread position: | 559-923 |
| Cow position: | chr14:16814184-16813811 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 135 |
| Conread position: | 566-806 |
| Cow position: | chr14:28198761-28198988 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 590-922 |
| Cow position: | chr14:121816-121473 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 603-865 |
| Cow position: | chr14:27243528-27243786 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 214, 46 |
| Conread position: | 628-923 |
| Cow position: | chr14:7940319-7940017 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 122 |
| Conread position: | 694-923 |
| Cow position: | chr14:26474111-26473891 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 742-865 |
| Cow position: | chr14:3751530-3751657 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 758-922 |
| Cow position: | chr14:24445631-24445461 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 759-921 |
| Cow position: | chr14:24206459-24206629 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 762-921 |
| Cow position: | chr14:9229084-9228917 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 763-921 |
| Cow position: | chr14:25934665-25934493 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 765-923 |
| Cow position: | chr14:8033117-8032957 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 775-920 |
| Cow position: | chr14:7950882-7950735 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 776-920 |
| Cow position: | chr14:12337508-12337360 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 122 |
Show alignments to all cow chromosomes.