Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 557-813 |
| Cow position: | chr15:11210115-11210374 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 557-898 |
| Cow position: | chr15:3727318-3727669 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 198 |
| Conread position: | 558-725 |
| Cow position: | chr15:26128123-26127954 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 558-821 |
| Cow position: | chr15:9012513-9012768 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 558-924 |
| Cow position: | chr15:15213879-15214254 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 116 |
| Conread position: | 560-920 |
| Cow position: | chr15:45618620-45618263 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 566-806 |
| Cow position: | chr15:31602973-31603213 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 566-806 |
| Cow position: | chr15:31942549-31942306 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 566-872 |
| Cow position: | chr15:8983526-8983229 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 157, 69 |
| Conread position: | 566-921 |
| Cow position: | chr15:36525382-36525014 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 567-813 |
| Cow position: | chr15:25890948-25891191 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 569-924 |
| Cow position: | chr15:39500184-39499819 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 585-908 |
| Cow position: | chr15:37364708-37365037 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 608-918 |
| Cow position: | chr15:31273537-31273870 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 631-919 |
| Cow position: | chr15:27867913-27867634 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 661-924 |
| Cow position: | chr15:10313946-10314200 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 166, 52 |
| Conread position: | 722-919 |
| Cow position: | chr15:26127692-26127489 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 760-923 |
| Cow position: | chr15:45237066-45237236 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 762-923 |
| Cow position: | chr15:12863894-12864058 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 135 |
Show alignments to all cow chromosomes.