Cow genome map


           Conread name:
           Ss1.1-raor015_j22.5
        

               Conread position:
               555-688
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 39
               

               Conread position:
               557-923
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 95
               

               Conread position:
               558-725
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               558-915
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 101
               

               Conread position:
               558-921
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 143
               

               Conread position:
               558-924
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 238
               

               Conread position:
               561-771
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               567-918
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               568-923
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               569-813
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 165
               

               Conread position:
               589-813
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               595-807
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               595-924
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 138
               

               Conread position:
               596-810
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               631-924
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               636-810
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               752-921
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               759-923
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               761-923
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               762-920
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               762-922
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.