Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 540-725 |
| Cow position: | chr19:4477852-4478044 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 554-924 |
| Cow position: | chr19:2772328-2771950 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 555-918 |
| Cow position: | chr19:8282626-8282993 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 114 |
| Conread position: | 557-693 |
| Cow position: | chr19:25312743-25312882 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 558-803 |
| Cow position: | chr19:48839749-48839996 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 558-813 |
| Cow position: | chr19:21109027-21108769 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 558-879 |
| Cow position: | chr19:38994390-38994714 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 191 |
| Conread position: | 558-922 |
| Cow position: | chr19:33517234-33517628 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 558-924 |
| Cow position: | chr19:22688402-22688765 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 566-828 |
| Cow position: | chr19:46626753-46626485 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 95 |
| Conread position: | 569-902 |
| Cow position: | chr19:44738456-44738789 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 585-921 |
| Cow position: | chr19:8450656-8451013 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 587-913 |
| Cow position: | chr19:2602762-2602430 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 595-800 |
| Cow position: | chr19:12790280-12790075 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 635-920 |
| Cow position: | chr19:18937428-18937717 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 731-919 |
| Cow position: | chr19:48049838-48049643 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 743-924 |
| Cow position: | chr19:14544180-14543992 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 158 |
| Conread position: | 762-919 |
| Cow position: | chr19:7671370-7671531 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 762-921 |
| Cow position: | chr19:33743625-33743782 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 109 |
Show alignments to all cow chromosomes.