Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 557-923 |
| Cow position: | chr21:3790245-3789873 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 558-794 |
| Cow position: | chr21:46770784-46770542 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 558-916 |
| Cow position: | chr21:2988782-2988411 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 558-921 |
| Cow position: | chr21:26575661-26576031 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 560-771 |
| Cow position: | chr21:20541569-20541773 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 564-924 |
| Cow position: | chr21:13391129-13391493 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 185 |
| Conread position: | 566-921 |
| Cow position: | chr21:22513394-22513030 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 184 |
| Conread position: | 566-923 |
| Cow position: | chr21:1598273-1597917 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 571-806 |
| Cow position: | chr21:48533494-48533266 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 595-923 |
| Cow position: | chr21:2854923-2854596 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 609-907 |
| Cow position: | chr21:4510421-4510115 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 754-921 |
| Cow position: | chr21:6326861-6326687 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 759-921 |
| Cow position: | chr21:6134851-6134684 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 759-921 |
| Cow position: | chr21:7074374-7074204 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 759-921 |
| Cow position: | chr21:8850913-8851077 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 759-921 |
| Cow position: | chr21:20786204-20786035 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 761-922 |
| Cow position: | chr21:44721746-44721912 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 762-921 |
| Cow position: | chr21:24735576-24735413 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 762-923 |
| Cow position: | chr21:24428935-24429103 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 768-921 |
| Cow position: | chr21:41548290-41548131 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 775-921 |
| Cow position: | chr21:23639857-23639708 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 134 |
Show alignments to all cow chromosomes.