Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 537-924 |
| Cow position: | chr22:43969154-43969547 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 549-916 |
| Cow position: | chr22:8844147-8843769 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 554-890 |
| Cow position: | chr22:2410095-2409757 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 557-917 |
| Cow position: | chr22:6193740-6193377 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 558-711 |
| Cow position: | chr22:12152441-12152599 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 558-763 |
| Cow position: | chr22:5459833-5459623 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 559-806 |
| Cow position: | chr22:22495775-22495530 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 566-804 |
| Cow position: | chr22:36608592-36608828 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 566-923 |
| Cow position: | chr22:6555045-6555394 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 189 |
| Conread position: | 585-921 |
| Cow position: | chr22:5350956-5350606 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 591-923 |
| Cow position: | chr22:10467717-10468047 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 595-813 |
| Cow position: | chr22:31687927-31687709 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 602-918 |
| Cow position: | chr22:11403734-11404082 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 161 |
| Conread position: | 754-924 |
| Cow position: | chr22:45605118-45604941 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 759-918 |
| Cow position: | chr22:5653753-5653593 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 761-918 |
| Cow position: | chr22:26040253-26040093 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 762-914 |
| Cow position: | chr22:28532636-28532795 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.