Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 557-741 |
| Cow position: | chr23:2502483-2502297 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 557-803 |
| Cow position: | chr23:4521154-4520903 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 558-728 |
| Cow position: | chr23:22714518-22714347 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 559-919 |
| Cow position: | chr23:5914828-5914450 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 140 |
| Conread position: | 568-746 |
| Cow position: | chr23:22696042-22696226 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 576-919 |
| Cow position: | chr23:2284315-2284664 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 589-815 |
| Cow position: | chr23:29429465-29429235 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 590-921 |
| Cow position: | chr23:20076153-20076502 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 599-924 |
| Cow position: | chr23:6590894-6591225 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 630-923 |
| Cow position: | chr23:4352842-4353140 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 743-924 |
| Cow position: | chr23:10705612-10705423 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 759-919 |
| Cow position: | chr23:39492085-39491918 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 759-921 |
| Cow position: | chr23:4785528-4785701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 760-902 |
| Cow position: | chr23:38221123-38221270 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 760-924 |
| Cow position: | chr23:36379419-36379590 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 762-921 |
| Cow position: | chr23:4506424-4506591 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 762-921 |
| Cow position: | chr23:21730444-21730278 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 762-921 |
| Cow position: | chr23:27010272-27010442 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 768-923 |
| Cow position: | chr23:4456405-4456243 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.