Cow genome map


           Conread name:
           Ss1.1-raor015_j22.5
        

               Conread position:
               553-859
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               557-780
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               143, 76
               

               Conread position:
               557-872
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               558-711
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               558-804
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               558-806
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               558-813
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               558-827
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               72, 97
               

               Conread position:
               558-917
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 109
               

               Conread position:
               560-710
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               567-813
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 190
               

               Conread position:
               591-865
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               8, 180
               

               Conread position:
               593-728
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               593-921
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               595-918
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               41, 160
               

               Conread position:
               595-923
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               597-922
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               655-921
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               731-920
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               751-924
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               754-924
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               759-908
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               759-917
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               759-923
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               759-924
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               761-921
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               762-916
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               762-918
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               762-918
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               762-921
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               762-923
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               768-923
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               768-924
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               65, 26
               
Show alignments to all cow chromosomes.