Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 551-921 |
| Cow position: | chr27:22630253-22629869 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 556-887 |
| Cow position: | chr27:26513341-26512999 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 194 |
| Conread position: | 558-872 |
| Cow position: | chr27:24909038-24908724 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 566-923 |
| Cow position: | chr27:15408864-15408492 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 567-813 |
| Cow position: | chr27:27286049-27285804 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 572-921 |
| Cow position: | chr27:22277609-22277254 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 588-924 |
| Cow position: | chr27:15218536-15218190 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 165 |
| Conread position: | 754-918 |
| Cow position: | chr27:24717615-24717780 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 756-921 |
| Cow position: | chr27:29673811-29673640 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 756-923 |
| Cow position: | chr27:24722622-24722439 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 759-921 |
| Cow position: | chr27:26124469-26124638 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 759-924 |
| Cow position: | chr27:13705237-13705069 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 760-922 |
| Cow position: | chr27:11478209-11478377 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 761-923 |
| Cow position: | chr27:1791064-1791229 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 762-921 |
| Cow position: | chr27:15106384-15106219 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 764-924 |
| Cow position: | chr27:11596072-11596229 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 765-923 |
| Cow position: | chr27:22441650-22441815 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 765-923 |
| Cow position: | chr27:24715953-24715790 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 97 |
Show alignments to all cow chromosomes.