Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 548-804 |
| Cow position: | chr29:20608372-20608635 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 555-806 |
| Cow position: | chr29:42498560-42498811 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 556-921 |
| Cow position: | chr29:4885187-4885559 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 557-807 |
| Cow position: | chr29:14145568-14145820 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 558-704 |
| Cow position: | chr29:12044426-12044577 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 558-733 |
| Cow position: | chr29:886618-886801 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 558-763 |
| Cow position: | chr29:41022146-41021944 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 558-924 |
| Cow position: | chr29:9409782-9409413 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 64 |
| Conread position: | 573-806 |
| Cow position: | chr29:4766913-4766676 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 584-924 |
| Cow position: | chr29:10118313-10118646 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 729-896 |
| Cow position: | chr29:41345437-41345609 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 745-923 |
| Cow position: | chr29:41021940-41021754 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 752-920 |
| Cow position: | chr29:1627379-1627552 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 754-920 |
| Cow position: | chr29:26946287-26946115 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 759-923 |
| Cow position: | chr29:37986910-37987081 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 760-921 |
| Cow position: | chr29:29783470-29783638 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 761-921 |
| Cow position: | chr29:3335818-3335985 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.