Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 549-898 |
| Cow position: | chr7:40708836-40708489 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 209 |
| Conread position: | 553-918 |
| Cow position: | chr7:55696886-55697255 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 554-924 |
| Cow position: | chr7:11430939-11431304 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 555-807 |
| Cow position: | chr7:19188217-19188471 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 556-813 |
| Cow position: | chr7:6008332-6008590 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 77, 99 |
| Conread position: | 557-919 |
| Cow position: | chr7:28895201-28894836 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 557-924 |
| Cow position: | chr7:49211997-49211624 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 558-806 |
| Cow position: | chr7:38094485-38094731 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 558-872 |
| Cow position: | chr7:4722254-4722568 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 558-923 |
| Cow position: | chr7:14869017-14869394 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 558-923 |
| Cow position: | chr7:16491457-16491834 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 558-923 |
| Cow position: | chr7:23455946-23456306 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 560-755 |
| Cow position: | chr7:57006375-57006181 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 567-923 |
| Cow position: | chr7:2269991-2270357 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 188 |
| Conread position: | 595-918 |
| Cow position: | chr7:45598071-45598418 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 597-742 |
| Cow position: | chr7:25851468-25851620 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 597-922 |
| Cow position: | chr7:28004985-28005300 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 674-924 |
| Cow position: | chr7:1822854-1822614 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 726-923 |
| Cow position: | chr7:25851748-25851950 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 751-922 |
| Cow position: | chr7:16701842-16702010 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 754-921 |
| Cow position: | chr7:43899812-43899638 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 759-921 |
| Cow position: | chr7:45939689-45939860 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 760-921 |
| Cow position: | chr7:5026553-5026380 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 760-923 |
| Cow position: | chr7:32826441-32826609 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 761-921 |
| Cow position: | chr7:47884633-47884470 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 768-919 |
| Cow position: | chr7:52896988-52896840 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 780-923 |
| Cow position: | chr7:17219944-17220094 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.