Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 522-758 |
| Cow position: | chr8:7853545-7853786 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 536-813 |
| Cow position: | chr8:44481213-44481505 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 288 |
| Conread position: | 541-923 |
| Cow position: | chr8:9804822-9804430 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 55 |
| Conread position: | 547-813 |
| Cow position: | chr8:6392719-6392989 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 45, 225 |
| Conread position: | 552-813 |
| Cow position: | chr8:9076267-9076521 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 143 |
| Conread position: | 557-806 |
| Cow position: | chr8:50703315-50703067 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 558-740 |
| Cow position: | chr8:61147726-61147538 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 558-806 |
| Cow position: | chr8:8725295-8725534 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 60 |
| Conread position: | 558-918 |
| Cow position: | chr8:47184299-47184673 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 234 |
| Conread position: | 558-921 |
| Cow position: | chr8:44483874-44484248 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 558-921 |
| Cow position: | chr8:51994030-51993666 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 558-924 |
| Cow position: | chr8:18715219-18714849 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 566-849 |
| Cow position: | chr8:34294293-34294007 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 566-921 |
| Cow position: | chr8:57532748-57533126 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 582-806 |
| Cow position: | chr8:39003817-39004036 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 630-924 |
| Cow position: | chr8:48760963-48761264 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 121 |
| Conread position: | 656-920 |
| Cow position: | chr8:9826912-9826642 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 754-918 |
| Cow position: | chr8:54009428-54009598 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 146 |
| Conread position: | 757-921 |
| Cow position: | chr8:25582492-25582323 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 761-921 |
| Cow position: | chr8:13847548-13847386 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 5 |
| Conread position: | 761-921 |
| Cow position: | chr8:45857946-45858113 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 762-923 |
| Cow position: | chr8:1282129-1281966 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 76 |
Show alignments to all cow chromosomes.