Cow genome map
| Conread name: | Ss1.1-raor015_j22.5 |
| Conread position: | 555-815 |
| Cow position: | chrX:46566990-46566724 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 78, 91 |
| Conread position: | 557-806 |
| Cow position: | chrX:40312571-40312317 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 162 |
| Conread position: | 557-879 |
| Cow position: | chrX:18080783-18080460 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 558-813 |
| Cow position: | chrX:43713499-43713758 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 196 |
| Conread position: | 559-920 |
| Cow position: | chrX:28859350-28858984 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 566-810 |
| Cow position: | chrX:21245720-21245973 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 605-924 |
| Cow position: | chrX:29035684-29036030 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 755-923 |
| Cow position: | chrX:22436866-22437041 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 759-923 |
| Cow position: | chrX:45570032-45569866 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 761-916 |
| Cow position: | chrX:33159231-33159071 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 765-920 |
| Cow position: | chrX:40316032-40315871 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 770-919 |
| Cow position: | chrX:29815975-29815829 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 770-921 |
| Cow position: | chrX:16893762-16893608 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 29 |
Show alignments to all cow chromosomes.