Cow genome map
| Conread name: | Ss1.1-rcbl0_005307.5 |
| Conread position: | 590-912 |
| Cow position: | chr1:605286-605622 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 592-912 |
| Cow position: | chr1:80303287-80302953 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 6, 29 |
| Conread position: | 594-784 |
| Cow position: | chr1:88966484-88966675 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 594-912 |
| Cow position: | chr1:13219661-13219329 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 594-912 |
| Cow position: | chr1:26078392-26078061 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 594-912 |
| Cow position: | chr1:68775614-68775278 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 594-912 |
| Cow position: | chr1:69068650-69068986 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 597-904 |
| Cow position: | chr1:72849606-72849292 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 597-910 |
| Cow position: | chr1:14380034-14380353 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 597-912 |
| Cow position: | chr1:23086970-23087295 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 601-912 |
| Cow position: | chr1:7174517-7174841 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 602-912 |
| Cow position: | chr1:76327393-76327070 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 604-870 |
| Cow position: | chr1:82150318-82150580 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 609-912 |
| Cow position: | chr1:53127848-53128156 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 622-875 |
| Cow position: | chr1:56866477-56866734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 624-885 |
| Cow position: | chr1:54904694-54904959 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 626-881 |
| Cow position: | chr1:2966205-2965936 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 626-912 |
| Cow position: | chr1:880375-880081 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 629-850 |
| Cow position: | chr1:64253781-64254013 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 185 |
| Conread position: | 658-912 |
| Cow position: | chr1:23515801-23516073 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 675-910 |
| Cow position: | chr1:3003110-3003351 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 679-910 |
| Cow position: | chr1:35243412-35243643 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 682-912 |
| Cow position: | chr1:60258522-60258281 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.