Cow genome map


           Conread name:
           Ss1.1-rcbl0_005307.5
        

               Conread position:
               597-885
               

               Cow position:
               chr17:20241527-20241808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               597-908
               

               Cow position:
               chr17:1539868-1540184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               599-871
               

               Cow position:
               chr17:12352573-12352294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               621-871
               

               Cow position:
               chr17:28168553-28168813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               622-874
               

               Cow position:
               chr17:20827343-20827078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               622-912
               

               Cow position:
               chr17:11099036-11099349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               625-871
               

               Cow position:
               chr17:13200628-13200387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 29
               
Show alignments to all cow chromosomes.