Cow genome map
| Conread name: | Ss1.1-rcbl0_005307.5 |
| Conread position: | 568-908 |
| Cow position: | chr3:76282059-76282419 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 589-912 |
| Cow position: | chr3:12590379-12590703 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 591-909 |
| Cow position: | chr3:40781364-40781043 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 592-912 |
| Cow position: | chr3:78916405-78916742 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 594-869 |
| Cow position: | chr3:17609944-17609663 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 597-782 |
| Cow position: | chr3:58984634-58984448 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 597-889 |
| Cow position: | chr3:48482882-48482586 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 597-903 |
| Cow position: | chr3:44075459-44075146 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 597-910 |
| Cow position: | chr3:58240582-58240252 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 597-912 |
| Cow position: | chr3:12662626-12662962 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 597-912 |
| Cow position: | chr3:28446519-28446187 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 597-912 |
| Cow position: | chr3:63804930-63805241 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 607-912 |
| Cow position: | chr3:21832924-21833232 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 169, 31 |
| Conread position: | 614-909 |
| Cow position: | chr3:21068613-21068911 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 622-885 |
| Cow position: | chr3:34471997-34471722 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 622-912 |
| Cow position: | chr3:25098183-25098499 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 299 |
| Conread position: | 626-912 |
| Cow position: | chr3:48484867-48484555 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 631-830 |
| Cow position: | chr3:5720620-5720821 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 134 |
| Conread position: | 636-910 |
| Cow position: | chr3:79378441-79378150 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 210 |
| Conread position: | 636-912 |
| Cow position: | chr3:52410102-52410396 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 200 |
| Conread position: | 657-912 |
| Cow position: | chr3:34202521-34202782 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 688-912 |
| Cow position: | chr3:70124129-70124359 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 21, 173 |
Show alignments to all cow chromosomes.