Cow genome map


           Conread name:
           Ss1.1-rcbl0_005307.5
        

               Conread position:
               580-911
               

               Cow position:
               chr5:45880028-45880371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               594-912
               

               Cow position:
               chr5:15797976-15797644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               595-843
               

               Cow position:
               chr5:53982823-53983082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               597-885
               

               Cow position:
               chr5:40905661-40905951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               597-906
               

               Cow position:
               chr5:46656634-46656304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               597-911
               

               Cow position:
               chr5:27500197-27500516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               597-912
               

               Cow position:
               chr5:13437779-13438106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               604-910
               

               Cow position:
               chr5:36365046-36364724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               622-912
               

               Cow position:
               chr5:30180876-30180578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               625-893
               

               Cow position:
               chr5:69562641-69562911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               176, 16
               

               Conread position:
               626-904
               

               Cow position:
               chr5:14329199-14328903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               677-881
               

               Cow position:
               chr5:18032077-18031871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 16
               
Show alignments to all cow chromosomes.